MeRGE Expo

Full page listing

Data Preparation

Data assembly and documentation with mrgda.
yspec
mrgda
data assembly

Exploratory Data Analysis Tables

Report-quality exploratory data summary tables with pmtables.
yspec
eda
pmtables
reporting
latex

Exploratory Data Analysis Figures

Report-quality exploratory data plots with pmplots.
yspec
eda
pmplots
mrggsave
reporting

Model Management

Example model submission workflow with bbr.
bbr
model management
nonmem

Parallelizing with bbr

Parallelizing NONMEM models using bbr.
bbr
nonmem

Model Run Logs

Summarizing your modeling work with bbr “run logs.”
bbr
nonmem

Simulate from Model EBE

Simulate outcomes from model empirical Bayes estimates with mrgsolve.
mrgsolve

Model Diagnostics

Model diagnostics with pmplots and yspec.
diagnostics
pmplots
yspec
post processing
reporting

Visual Predictive Check

Perform visual predictive checks with mrgsolve and the vpc package.
vpc
mrgsolve
mrggsave

Bootstrap generate and collect

Create bootstrapped data sets to obtain parameter estimates
bbr

Parameter Tables

Generate parameter tables with pmtables and yspec.
pmtables
bbr

Covariate Forest Plots

Simulate outcomes from model empirical Bayes estimates with mrgsolve.
pmforest
mrgsolve

Parameterized Reports for Model Diagnostics

Model diagnostics with pmplots, yspec and parameterized reports.
diagnostics
pmplots
yspec
mrggsave
post processing
reporting

Data Definitions

Data definitions for the pk.csv PK model data set.
yspec
data

Introduction to mrggsave

Save figures with annotation.
mrggsave

Creating a Parameter Key

Parameter descriptions for PK model parameter tables.
yaml

Introduction to pmforest

Display point estimates and variability ranges with pmforest.
pmforest

Introduction to MetrumRG tools

Brief overview of MetrumRG tools
mpn
pkgr
bbr
mrggsave
mrgsolve
pmforest
pmplots
pmtables
yspec
pmparams
mrgda

Introduction to yspec

An overview of yspec and the creation of data specification objects.
yspec

Naming Conventions

Use naming conventions that comply with the current guidelines of FDA, EMA and PMDA.

About the Model

Overview of the Expo pharmacokinetic (PK) model.
model
info

Introduction to pmplots

Exploratory and diagnostic plots for pharmacometrics.
pmplots

About Metworx

Study Summary

Summarize the study data sources with text summary or table.
yspec
pmtables
reporting

About the Github Repo

No matching items